V.S. Ananthanarayanan

Professor, Deparment of Biochemistry
M.Sc., Ph.D. (Madras)

Location: Health Sciences Centre, Rm 4H25B

Phone:(905) 525-9140 ex. 22783

Fax: (909) 522-9033

Email: ananth@mcmaster.ca

See my personal web site

Structure-function correlations in proteins, peptide hormones and drags

In biology, as elsewhere, form and function are intricately related.  In our laboratory, we try to relate the structures of biomolecules with their functions.


Antifreeze Proteins (AFPs)

Several cold-water fish make AFPs to
lower their serum freezing point and  hereby avoid death. Using physical methods, we have obtained the structure of several AFPs.  We have also made some synthetic AFPs. Collaborating with other Canadian scientists, we hope to solve the mystery of AFP action.

Collagen-Related Enzymes.

Using synthetic peptide substrates,
we have mapped the active sites of the enzymes that hydroxylate proline and lysine in collagen, the most abundant body protein. A similar approach is being pursued on collagenase whose action is important in arthritis, tumour and wound healing. We overexpress
collagenase  domains  and  determine  their  structures  by spectroscopic methods and by site-directed  mutagenesis.

Hormones and Drugs.

Design of potent hormone/drug depends
on knowing its receptor-bound conformation. We had hypothesized this to be the Ca2+ bound form of the hormone/drug. Using CD, fluorescence, NMR and modeling computations, we study the structures of peptide hormones and calcium channel drugs and their interactions with Ca2+and lipid membrane. We are trying to overexpress transmembrane segments of selected receptors and ion channels to assess the role of Ca2+ in signal transduction.

Selected Publications

Signal transduction within G-protein-coupled receptors via an ion tunnel: A hypothesis.  Zhorov, B.S. and Ananthanarayanan, V.S. (1998) J. Biomol. Struct. Dynamics 15: 631-637.

Interaction of gonadotropin-releasing hormone and its agonist analogs with Ca2+ in a nonpolar milieu. Correlation with biopotencies. Ananthanarayanan, V. S., Salehian, O. and Brimble, K.S.(1998) J. Peptide Res. 52: 1-11.

Docking of verapamil in a synthetic Ca2+channel: Formation of a ternary complex involving Ca2+Zhorov, B.S. and Ananthanarayanan, V.S. (1997) Arch. Biochem. Biophys. 341: 238-244.

Structural model of a synthetic Ca2+channel with bound Ca2+ ions and dihydropyridine ligand.  Zhorov, B.S. and Ananthanarayanan, V.S. (1996) Biophys. J. 70: 22-37.

Ca2+-dependent antifreeze proteins. Modulation of conformation and activity  by  divalent  metal  ions.     Ewart,  K.V.,  Yang,  D.S.,Ananthanarayanan, V.S., Fletcher, G.L. and Hew, C.L. (1996) J. Biol. Chem.271:16627-16632.

Interaction of oxytocin with Ca2+: I & II.  Ananthanarayanan, V.S., Brimble, K.S., Belciug, M.P. and Zhorov, B.S. (1996) Biopolymers 40:
433-443 & 445-464.

Interaction of peptide substrates of fibroblast collagenase with divalent cations: Ca2+ binding by substrate as a suggested recognition signal for
collagenase action.  Upadhye, S. and Ananthanarayanan, V.S. (1995) Biochem. Biophys. Res. Commun. 215: 474-482.

Conformational analysis of the Ca2+ bound opioid peptides: Implications for ligand-receptor interaction. Zhorov, B.S. and Ananthanarayanan, V.S. (1995) J. Biomol. Struct. Dyn. 13: 1-13.

Interaction of calcium channel antagonists with calcium: Structural studies  on nicardipine and its  Ca2+ complex.   Belciug,  M.  And Ananthanarayanan, V.S. (1994) J. Med. Chem. 37: 4392-4399.

Conformational analysis of the free and Caz'-bound forms of verapamil and methoxyverapamil. Zhorov, B.S. and Ananthanarayanan, V.S.(1993)
J. Biomol. Struct. Dyn. 11: 529-540.

Conformational studies on calcium binding by tBoc-Leu-Pro-Tyr-Ala-NHCH3, a tyrosine kinase substrate. Ananthanarayanan, V.S., Saint-Jean, A.,
Cheesman, B., Hughes, D. and Pain, A. (1993) J. Biomol. Struct. Dyn. 11: 509-528.

Calcium binding and translocation properties of glucagon and its fragments.   Brimble, K.S. and Ananthanarayanan, V.S.   (1993) Biochemistry 32: 1632-1640.

Peptide hormones, neurotransmitters and drugs as Ca2' ionophores: Implications for signal transduction.  Ananthanarayanan, V.S. (1991)
Biochem. Cell. Biol. 69: 93-95.