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Structure-function correlations in proteins,
peptide hormones and drags
In biology, as elsewhere, form and function are intricately related.
In our laboratory, we try to relate the structures of biomolecules
with their functions.
Antifreeze Proteins
(AFPs)
Several cold-water fish make AFPs to
lower their serum freezing point and hereby avoid death.
Using physical methods, we have obtained the structure of several
AFPs. We have also made some synthetic AFPs. Collaborating
with other Canadian scientists, we hope to solve the mystery
of AFP action.
Collagen-Related Enzymes.
Using synthetic peptide substrates,
we have mapped the active sites of the enzymes that hydroxylate
proline and lysine in collagen, the most abundant body protein.
A similar approach is being pursued on collagenase whose action
is important in arthritis, tumour and wound healing. We overexpress
collagenase domains and determine their
structures by spectroscopic methods and by site-directed
mutagenesis.
Hormones and Drugs.
Design of potent hormone/drug depends
on knowing its receptor-bound conformation. We had hypothesized
this to be the Ca2+ bound form of the hormone/drug.
Using CD, fluorescence, NMR and modeling computations, we study
the structures of peptide hormones and calcium channel drugs
and their interactions with Ca2+and lipid membrane.
We are trying to overexpress transmembrane segments of selected
receptors and ion channels to assess the role of Ca2+
in signal transduction. |
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Selected Publications
Signal transduction within G-protein-coupled receptors via an
ion tunnel: A hypothesis. Zhorov, B.S. and Ananthanarayanan,
V.S. (1998) J. Biomol. Struct. Dynamics 15: 631-637.
Interaction of gonadotropin-releasing hormone and its agonist
analogs with Ca2+ in a nonpolar milieu. Correlation
with biopotencies. Ananthanarayanan, V. S., Salehian, O. and
Brimble, K.S.(1998) J. Peptide Res. 52: 1-11.
Docking of verapamil in a synthetic Ca2+channel: Formation
of a ternary complex involving Ca2+Zhorov, B.S. and
Ananthanarayanan, V.S. (1997) Arch. Biochem. Biophys. 341:
238-244.
Structural model of a synthetic Ca2+channel with bound
Ca2+ ions and dihydropyridine ligand. Zhorov,
B.S. and Ananthanarayanan, V.S. (1996) Biophys. J. 70:
22-37.
Ca2+-dependent antifreeze proteins. Modulation of
conformation and activity by divalent metal
ions. Ewart, K.V., Yang,
D.S.,Ananthanarayanan, V.S., Fletcher, G.L. and Hew, C.L. (1996)
J. Biol. Chem.271:16627-16632.
Interaction of oxytocin with Ca2+: I & II.
Ananthanarayanan, V.S., Brimble, K.S., Belciug, M.P. and Zhorov,
B.S. (1996) Biopolymers 40:
433-443 & 445-464.
Interaction of peptide substrates of fibroblast collagenase with
divalent cations: Ca2+ binding by substrate as a suggested
recognition signal for
collagenase action. Upadhye, S. and Ananthanarayanan, V.S.
(1995) Biochem. Biophys. Res. Commun. 215: 474-482.
Conformational analysis of the Ca2+ bound opioid peptides:
Implications for ligand-receptor interaction. Zhorov, B.S. and
Ananthanarayanan, V.S. (1995) J. Biomol. Struct. Dyn. 13: 1-13.
Interaction of calcium channel antagonists with calcium: Structural
studies on nicardipine and its Ca2+ complex.
Belciug, M. And Ananthanarayanan, V.S. (1994)
J. Med. Chem. 37: 4392-4399.
Conformational analysis of the free and Caz'-bound forms of verapamil
and methoxyverapamil. Zhorov, B.S. and Ananthanarayanan, V.S.(1993)
J. Biomol. Struct. Dyn. 11: 529-540.
Conformational studies on calcium binding by tBoc-Leu-Pro-Tyr-Ala-NHCH3,
a tyrosine kinase substrate. Ananthanarayanan, V.S., Saint-Jean,
A.,
Cheesman, B., Hughes, D. and Pain, A. (1993) J. Biomol. Struct.
Dyn. 11: 509-528.
Calcium binding and translocation properties of glucagon and
its fragments. Brimble, K.S. and Ananthanarayanan,
V.S. (1993) Biochemistry 32: 1632-1640.
Peptide hormones, neurotransmitters and drugs as Ca2' ionophores:
Implications for signal transduction. Ananthanarayanan,
V.S. (1991)
Biochem. Cell. Biol. 69: 93-95. |
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